Articles
  • • Muhar M, Ebert A, Neumann T, Umkehrer C, Jude J, Wieshofer C, Rescheneder P, Lipp JJ, Herzog VA, Reichholf B, Cisneros DA, Hoffmann T, Schlapansky MF, Bhat P, von Haeseler A, Köcher T, Obenauf AC, Popow J, Ameres SL & Zuber J: SLAM-seq defines direct gene regulatory functions of the BRD4-MYC axis. Science, 2018. 360(6390), 800–805.
  • • Herzog VA, Reichholf B, Neumann T, Rescheneder P, Bhat P, Burkard TR, Wlotzka W, von Haeseler A, Zuber J & Ameres SL: Thiol-linked alkylation of RNA to assess expression dynamics. Nature Methods, 2017. 14(12), 1198–1204.
  • • Kaiser T, Poehn P, Szkiba D, Preussner M, Sedlazeck F, Zrim A, Neumann T, Nguyen LT, Betancourt A, Hummel T, Vogel H, Dorner S, Heyd F, Arndt von Haeseler A & Tessmar-Raible K: The genomic basis of circadian and circalunar timing adaptations in a midge. Nature, 2016. 540(7631), 69–73.
  • • Rathert P*, Roth M*, Neumann T, Muerdter F, Roe J-S, Muhar M, Deswal S, Cerny-Reiterer S, Peter B, Jude J, Ho mann T, Boryn LM, Axelsson E, Schweifer N, Tontsch-Grunt U, Dow LE, Gianni D, Pearson M, Valent P, Stark A, Kraut N, Vakoc CR & Zuber J: Transcriptional plasticity promotes primary and acquired resistance to BET inhibition. Nature, 2015. 525(7570), 543–547.
  • • Matsushima W, Herzog VA, Neumann T, Gapp K, Zuber J, Stefan L Ameres SL & Miska EA: SLAM-ITseq: Sequencing cell type-specific transcriptomes without cell sorting. Development, 2018. 145(13).
  • • Fitz J, Neumann T & Pavri R: Regulation of RNA polymerase II processivity by Spt5 is restricted to a narrow window during elongation. EMBO J, 2018. 37(8), e97965.
  • • Chipman AD, Ferrier DEK, Brena C, Qu J, Hughes DST [...], Neumann T et al.: The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima. PLoS Biology, 2014. 12(11), e1002005.
Talks
  • • Neumann T: SLAMdunk – a pipeline for analyzing SLAMseq data in established and emerging applications, Orlando, USA, 2018. AGBT 2018
Posters
  • • Neumann T, Herzog VA, Muhar M, von Haeseler A, Zuber J, Ameres SL & Rescheneder P: Quantifying experimentally induced nucleotide-conversions in high-throughput sequencing, Orlando, USA, 2018. AGBT 2018