Splice_sim - Benchmarking RNA-seq mapping in the age of nucleotide Ccnversions

A comprehensive simulation framework for evaluating mapping accuracies in nucleotide conversion RNA-seq experiments

Read more

2024-06-27
Benchmarking • Docker • Genomics • Nextflow • Python • RNA-seq

Orbital maneuvers

Changing orbital parameters using propulsion systems.

Read more

2019-09-08
Orbital mechanics • Orbital parameters • Orbits

Square numbers proof

Proof that the number of zeros at the end of a perfect square is always even.

Read more

2019-09-02
Mathematics • Proof • Square Number

Orbital basics

Basic definition, terminology and concepts of orbits

Read more

2019-08-26
Orbital mechanics • Orbital parameters • Orbits

Pipelines on AWS

Setting up and running a pipeline on AWS

Read more

2019-08-25
AMI • AWS • Containers • Docker • Nextflow

Slamdunk paper

SLAMseq analysis using Slamdunk for nucleotide-conversion sequencing datasets

Read more

2019-06-28
Bioconda • Containers • Docker • PyPI • SLAMseq • Slamdunk

Pipelines with Nextflow

Setting up and running a pipeline with Nextflow

Read more

2019-03-03
Containers • Docker • Nextflow

AWS architecture outline

Resources to consider for engineering pipelines on AWS

Read more

2019-02-10
AMI • AWS • Containers • Docker • Nextflow

Welcome to my website!

Bioinformatician's life hacks and more

Read more

2019-01-17
update